cnrun – NeuroML-capable neuronal network simulator

CNrun is a neuronal network model simulator, similar in purpose to NEURON except that individual neurons are not compartmentalised. It can read NeuroML files (e.g., as generated by neuroConstruct); provides a Hodgkin-Huxley neuron (plus some varieties), a Rall and Alpha-Beta synapses, Poisson, Van der Pol, Colpitts oscillators and regular pulse generator; external inputs and logging state variables. Uses a 6-5 Runge-Kutta integration method. Basic scripting and (if run interactively) context-aware autocompletion.

Reference:
Zavada, A., Buckley, C.L., Martinez, D., Rospars, J-P., Nowotny, T. (2011). Competition-based model of pheromone component ratio detection in the moth. PLoS ONE, 6, e16308. [Abstract] [DOI] [Pubmed]
Package availability chart
Distribution Base version Our version Architectures
Debian GNU/Linux 7.0 (wheezy)   1.1.14-1~nd70+1 i386, amd64
Debian GNU/Linux 8.0 (jessie) 1.1.14-1 1.1.14-1~nd80+1 i386, amd64
Debian unstable (sid)   1.1.14-1~nd+1 i386, amd64
Ubuntu 12.04 LTS “Precise Pangolin” (precise)   1.1.14-1~nd12.04+1 i386, amd64
Ubuntu 14.04 “Trusty Tahr” (trusty) 1.1.14-1ubuntu1    
Ubuntu 16.04 “Xenial Xerus” (xenial) 1.1.14-1.1    

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