cmtk – Computational Morphometry Toolkit

A software toolkit for computational morphometry of biomedical images, CMTK comprises a set of command line tools and a back-end general-purpose library for processing and I/O.

The command line tools primarily provide the following functionality: registration (affine and nonrigid; single and multi-channel; pairwise and groupwise), image correction (MR bias field estimation; interleaved image artifact correction), processing (filters; combination of segmentations via voting and STAPLE; shape-based averaging), statistics (t-tests; general linear regression).

Reference:

T. Rohlfing (2009). User Guide to The Computational Morphometry Toolkit. *The Insight Journal, *, . [Abstract]

Package availability chart

Distribution

Base version

Our version

Architectures

Debian GNU/Linux 10.0 (buster)

3.3.1p1+dfsg-1

Debian GNU/Linux 11.0 (bullseye)

3.3.1p1+dfsg-2

Debian GNU/Linux 12.0 (bookworm)

3.3.1p2+dfsg-2

Debian GNU/Linux 9.0 (stretch)

3.3.1-1.1

3.3.1-1~nd90+1

i386, amd64

Debian testing (trixie)

3.3.1p2+dfsg-2

Debian unstable (sid)

3.3.1p2+dfsg-2

3.3.1-1~nd+1

i386, amd64

Ubuntu 16.04 “Xenial Xerus” (xenial)

3.2.2-1.4

3.3.1-1~nd16.04+1

i386, amd64

Ubuntu 18.04 “Bionic Beaver” (bionic)

3.3.1-1.2build1

Ubuntu 20.04 “Focal Fossa” (focal)

3.3.1p1+dfsg-2build1

Ubuntu 22.04 “Jammy Jellyfish” (jammy)

3.3.1p2+dfsg-1build1

Comments

blog comments powered by Disqus