mricron – magnetic resonance image conversion, viewing and analysis

This is a GUI-based visualization and analysis tool for (functional) magnetic resonance imaging. MRIcron can be used to create 2D or 3D renderings of statistical overlay maps on brain anatomy images. Moreover, it aids drawing anatomical regions-of-interest (ROI), or lesion mapping, as well as basic analysis of functional timeseries (e.g. creating plots of peristimulus signal-change).

In addition to ‘mricron’, this package also provides ‘dcm2nii’ that supports converting DICOM and PAR/REC images into the NIfTI format, and ‘npm’ for non-parametric data analysis.

Reference:
Chris Rorden, Hans-Otto Karnath, Leonardo Bonilha (2007). Improving lesion-symptom mapping. *Journal of Cognitive Neuroscience, 19: 1081-1088, *, . [Abstract]
Package availability chart
Distribution Base version Our version Architectures
Debian GNU/Linux 6.0 (squeeze)   0.20130828.1~dfsg.1-1~nd60+1 i386, amd64
Debian GNU/Linux 7.0 (wheezy) 0.20120505.1~dfsg.1-1 0.20130828.1~dfsg.1-1~nd70+1 i386, amd64
Debian testing (jessie)   0.20130828.1~dfsg.1-1~nd80+1 i386, amd64
Debian unstable (sid) 0.20130828.1~dfsg.1-1 0.20130828.1~dfsg.1-1~nd+1 i386, amd64
Ubuntu 10.04 LTS “Lucid Lynx” (lucid)   0.20130828.1~dfsg.1-1~nd10.04+1 i386, amd64
Ubuntu 12.04 LTS “Precise Pangolin” (precise) 0.20110812.1~dfsg.1-1 0.20130828.1~dfsg.1-1~nd12.04+1 i386, amd64
Ubuntu 12.10 “Quantal Quetzal” (quantal) 0.20120505.1~dfsg.1-1 0.20130828.1~dfsg.1-1~nd12.10+1 i386, amd64
Ubuntu 13.04 “Raring Ringtail” (raring) 0.20120505.1~dfsg.1-1 0.20130828.1~dfsg.1-1~nd13.04+1 i386, amd64
Ubuntu 13.10 “Saucy Salamander” (saucy) 0.20120505.1~dfsg.1-1 0.20130828.1~dfsg.1-1~nd13.04+1+nd13.10+1 i386, amd64
Ubuntu 14.04 “Trusty Tahr” (trusty) 0.20120505.1~dfsg.1-1 0.20130828.1~dfsg.1-1~nd13.04+1+nd13.10+1+nd14.04+1 i386, amd64

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