mricron – magnetic resonance image conversion, viewing and analysis

This is a GUI-based visualization and analysis tool for (functional) magnetic resonance imaging. MRIcron can be used to create 2D or 3D renderings of statistical overlay maps on brain anatomy images. Moreover, it aids drawing anatomical regions-of-interest (ROI), or lesion mapping, as well as basic analysis of functional timeseries (e.g. creating plots of peristimulus signal-change).

In addition to ‘mricron’, this package also provides ‘dcm2nii’ that supports converting DICOM and PAR/REC images into the NIfTI format, and ‘npm’ for non-parametric data analysis.

External links:

Citable reference:
Chris Rorden, Hans-Otto Karnath, Leonardo Bonilha (2007). Improving lesion-symptom mapping. Journal of Cognitive Neuroscience, 19: 1081-1088.

Package Details

Package popularity

  • NITRC [2]: 227834
[1]Due to the nature of this data, the reported number can only be considered a conservative estimate of the lower bound of the true number of installations.
[2]This is the total number of downloads from NITRC for this software, comprising all releases for all platforms – typically not Debian packages.

Binary packages

NeuroDebian

The repository contains binary packages for the following distribution releases and system architectures. The corresponding source packages are available too.

Note

Do not download this package manually if you plan to use it regularly. Instead configure your package manager to use this repository by following the instructions on the front page.

Debian GNU/Linux 6.0 (squeeze) [main]:
0.20110812.1~dfsg.1-1~nd60+1 [i386, amd64]
Debian testing (wheezy) [main]:
0.20110413.1~dfsg.1-1~nd70+1 [i386, amd64]
Debian unstable (sid) [main]:
0.20110413.1~dfsg.1-1~nd+1 [i386, amd64]
Ubuntu 10.04 LTS “Lucid Lynx” (lucid) [main]:
0.20110812.1~dfsg.1-1~nd10.04+1 [i386, amd64]
Ubuntu 10.10 “Maverick Meerkat” (maverick) [main]:
0.20110812.1~dfsg.1-1~nd10.10+1 [i386, amd64]

See also

Debian

Debian testing (wheezy) [main]:
0.20110812.1~dfsg.1-1 [armel, amd64, i386, powerpc, sparc]
Debian unstable (sid) [main]:
0.20120505.1~dfsg.1-1 [amd64, armel, i386, powerpc, sparc]

See also

Ubuntu

Ubuntu 11.04 “Natty Narwhal” (natty) [universe]:
0.20101102.1~dfsg.1-1 [amd64, i386]
Ubuntu 11.10 “Oneiric Ocelot” (oneiric) [universe]:
0.20110413.1~dfsg.1-1 [amd64, i386]
Ubuntu 12.04 LTS “Precise Pangolin” (precise) [universe]:
0.20110812.1~dfsg.1-1 [amd64, i386]
quantal [universe]:
0.20110812.1~dfsg.1-1 [amd64, i386]

See also

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