solar-eclipse – genetic variance components analysis software

SOLAR-Eclipse is an extensive, flexible software package for genetic variance components analysis, including linkage analysis, quantitative genetic analysis, SNP association analysis (QTN and QTLD), and covariate screening. Operations are included for calculation of marker-specific or multipoint identity-by-descent (IBD) matrices in pedigrees of arbitrary size and complexity, and for linkage analysis of multiple quantitative traits and/or discrete traits which may involve multiple loci (oligogenic analysis), dominance effects, household effects, and interactions. Additional features include functionality for mega and meta-genetic analyses where data from diverse cohorts can be pooled to improve statistical significance.

Package availability chart
Distribution Base version Our version Architectures
Debian GNU/Linux 7.0 (wheezy)   8.1.1+git0-g8f32b4b-1~nd70+1 amd64
Debian GNU/Linux 8.0 (jessie)   8.1.1+git0-g8f32b4b-1~nd80+1 amd64
Debian unstable (sid)   8.1.1+git0-g8f32b4b-1~nd+1 amd64
Ubuntu 12.04 LTS “Precise Pangolin” (precise)   8.1.1+git0-g8f32b4b-1~nd12.04+1 amd64
Ubuntu 14.04 “Trusty Tahr” (trusty)   8.1.1+git0-g8f32b4b-1~nd14.04+1 amd64
Ubuntu 16.04 “Xenial Xerus” (xenial)   8.1.1+git0-g8f32b4b-1~nd16.04+1 amd64

Comments

blog comments powered by Disqus