python-nibabel – Python bindings to various neuroimaging data formats

NiBabel provides read and write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI, NIfTI1, MINC, as well as PAR/REC. The various image format classes give full or selective access to header (meta) information and access to the image data is made available via NumPy arrays. NiBabel is the successor of PyNIfTI.

This package also provides a commandline tools:

  • dicomfs - FUSE filesystem on top of a directory with DICOMs

  • nib-ls - ‘ls’ for neuroimaging files

  • parrec2nii - for conversion of PAR/REC to NIfTI images

Package availability chart

Distribution

Base version

Our version

Architectures

Debian GNU/Linux 10.0 (buster)

2.3.2-1

2.5.1-1~nd100+1

i386, amd64, sparc, armel, ppc64el

Debian GNU/Linux 11.0 (bullseye)

3.2.1-2

2.5.1-1~nd110+1

i386, amd64, sparc, armel

Debian GNU/Linux 12.0 (bookworm)

5.0.0-2

Debian GNU/Linux 9.0 (stretch)

2.1.0-1

2.5.1-1~nd90+1

i386, amd64, sparc, armel

Debian testing (trixie)

5.2.1-2

Debian unstable (sid)

5.2.1-2

2.5.1-1~nd+1

i386, amd64, sparc, armel

Ubuntu 16.04 “Xenial Xerus” (xenial)

2.0.2-2

2.4.1-1~nd16.04+1

i386, amd64, sparc, armel

Ubuntu 18.04 “Bionic Beaver” (bionic)

2.2.1-1

2.5.1-1~nd18.04+1

i386, amd64, sparc, armel

Ubuntu 20.04 “Focal Fossa” (focal)

2.5.1-3

Ubuntu 22.04 “Jammy Jellyfish” (jammy)

3.2.2-1

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