Packages made by Michael Hanke <mih@debian.org>

afni
  • afni (toolkit for analyzing and visualizing functional MRI data)
  • afni-common (miscellaneous scripts and data files for AFNI)
  • afni-dbg (debug symbols for AFNI)
  • afni-dev (header and static libraries for AFNI plugin development)
caret
  • caret (Computerized Anatomical Reconstruction and Editing Toolkit)
caret-data
cctools
condor
datalad
  • datalad (data files crawler and data distribution)
  • python-datalad (data files crawler and data distribution (Python 2))
dcm2niix
  • dcm2niix (converts DICOM and PAR/REC files into the NIfTI format)
dcmstack
debruijn
dicomnifti
  • dicomnifti (converts DICOM files into the NIfTI format)
dipy
  • python-dipy (toolbox for analysis of MR diffusion imaging data)
  • python-dipy-doc (toolbox for analysis of MR diffusion imaging data – documentation)
  • python-dipy-lib (toolbox for analysis of MR diffusion imaging data – extensions)
eeglab11
fsl
  • fsl (transitional dummy package)
  • fsl-5.0 (transitional dummy package)
  • fsl-5.0-core (analysis tools for FMRI, MRI and DTI brain imaging)
  • fsl-core (metapackage for the latest version of FSL)
fsl-eddy-nonfree
fsl-feeds
  • fsl-feeds (FSL Evaluation and Example Data Suite)
fsldata
fslmeta
  • fsl-5.0-complete (metapackage for the entire FSL suite (tools and data))
  • fsl-complete (metapackage for the entire FSL suite (tools and data))
fslpy
fslview
heudiconv
  • heudiconv (DICOM converter with support for structure heuristics)
incf-nidash-oneclick
indexed-gzip
isis
itksnap
  • itksnap (semi-automatic segmentation of structures in 3D images)
jasp
  • jasp (Bayesian statistics made accessible)
lazyarray
  • python-lazyarray (Python module providing a NumPy-compatible lazily-evaluated array)
matlab-support
mclaren-rhesus-macaque-atlas
mricron
mridefacer
mrtrix
  • mrtrix (diffusion-weighted MRI white matter tractography)
  • mrtrix-doc (documentation for mrtrix)
neo
  • python-neo (Python IO library for electrophysiological data formats)
neurodebian
neurosynth-data
nifticlib
nilearn
  • python-nilearn (fast and easy statistical learning on neuroimaging data (Python 2))
  • python3-nilearn (fast and easy statistical learning on neuroimaging data (Python 3))
nitime
  • python-nitime (timeseries analysis for neuroscience data (nitime))
  • python-nitime-doc (timeseries analysis for neuroscience data (nitime) – documentation)
odin
  • libodin-dev (static libraries and header for ODIN sequences)
  • mitools (view, convert and perform basic maths with medical image datasets)
  • odin (develop, simulate and run magnetic resonance sequences)
pprocess
props
psignifit3
pymvpa2
pymvpa2-tutorialdata
pynifti
  • python-nifti (Python interface to the NIfTI I/O libraries)
pynn
  • python-pynn (simulator-independent specification of neuronal network models)
pysurfer
python-neuroshare
python-quantities
  • python-quantities (Library for computation of physical quantities with units, based on numpy)
rorden-mri-tutorial
spm8
sri24-atlas
  • sri24-atlas (MRI-based brain atlas of normal adult human brain anatomy)
stabilitycalc
testkraut
  • testkraut (test and evaluate heterogeneous data processing pipelines)
via
  • libvia-dev (library for volumetric image analysis)
  • libvia-doc (VIA library API documentation)
  • libvia2 (library for volumetric image analysis)
  • via-bin (tools for volumetric image analysis)
vmri-nonfree
voxbo
  • voxbo (processing, statistical analysis, and display of brain imaging data)

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